Additional file 1.
A PDF file containing all supplementary methods, tables and figures as referred to in the main text. The additional file contains supplementary methods on 'LC-MS/MS' and 'Identification and quantitation of endogenous peptides', a link to all identification results as deposited in the ProteomeCommons.org Tranche, supplementary tables S1 ('List of patients included and CCP status of RA patients') and S2 ('LC-MS characteristics of identified citrullinated peptides and their noncitrullinated counterparts') and supplementary figures S1 ('Abundance of fibrinogen amino acids 414-433-derived peptides in RA patients and controls'), S2 ('Relative abundance of citrullinated peptides and their noncitrullinated counterparts') and S3 ('The presence of phosphorylated and citrullinated peptides in synovial fluid').
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Raijmakers et al. Arthritis Research & Therapy 2012 14:R114 doi:10.1186/ar3840